Data Analysis
We provide tools for automated high-throughput data processing in accordance with the open source data pipeline for HCS - based on the integrative software platform KNIME. The platform enables to integrate, share and process HCS data • up to entire Screening Pipelines • using a workflow-oriented architecture which can be used by (non-) experts.
Within the Workflow Repository we so far provide solutions for:
- Experiment MetaData → Handling of libraries, plate layouts, etc.
- Image Processing
- Statistics
- Microscope FeedBack → Target / Hit (re-) localisation on and between arbitrary microscopy platforms
For data processing and analysis a large number of integrations is available. For a simplified overview, see:
The overview also specifies integrations which are provided by BioQuant / RNAi Screening Facility - they can be downloaded as additional internal plugins.
» Contact / Further information:absf (at) bioquant.uni-heidelberg.de
Contact: E-Mail (Last update: 01/07/2019)